Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq28 262 7e-68 >seq28 Length=1232018 Score = 262 bits (290), Expect = 7e-68 Identities = 255/319 (80%), Gaps = 13/319 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCG--GGTCGCCGGCTTC 75 || ||||||| |||||||||||| ||| |||||| ||| ||| || |||| Sbjct 5595 GAACGAGACCCCCGCCTGCTAAATAGTGTGGCTTACGCTTTTGCGTAGGTACTCG-CTTC 5537 Query 76 TTAGAGGGACTATCGGCTCA--AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 ||||||||||| || | | | | || ||||||| | ||||||||||||||||||||| Sbjct 5536 TTAGAGGGACT-TCTGGTGACTAACCAGAGGAAGTTGGGGGCAATAACAGGTCTGTGATG 5478 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT---CATCA 190 ||||||||||| ||||||||||||||||||||||||| | ||||||||| | | Sbjct 5477 CCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGATGCATGCAACGAGTTTTACTTTT 5418 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC-TCTGTCGTGCTGGGGATAGAGCATT 249 ||| || || ||| | ||||||||| ||| ||| | ||||| | |||||||| |||| Sbjct 5417 CCTGGGTCGAGAGGCCCGGGTAATCT-GTTGAACGTGCATCGTGATAGGGATAGATCATT 5359 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||||| |||| |||||||||| |||||||| |||| ||||||||| ||| ||||| Sbjct 5358 GCAATTATTGATCTTGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGAT 5299 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 5298 TACGTCCCTGCCCTTTGTA 5280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947187970560