Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq30 111 5e-22 >seq30 Length=4005922 Score = 111 bits (122), Expect = 5e-22 Identities = 179/254 (70%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 36 ACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG--GT-GCGGTAACACGCCCTGG 92 |||||||||| ||||||| | || |||| ||| || | || ||||| | ||| Sbjct 1932029 ACCCGAAACCGGCTGATCTAAGCTTGAGCAGGCTGATATCGTAGTGGCAACACTCTTTGG 1931970 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 | | |||||||| |||| | ||||| ||||||| || | |||||||||||||| Sbjct 1931969 AAGGCCGAACCCGTGTATGTGGCAAAATACTGGGATGACTTGAGTTTAGGGGTGAAAGGC 1931910 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGT-- 210 || |||| | || |||||||| | ||| ||||| ||||| | |||| || || || Sbjct 1931909 CAATCAAAGTCGGTGATAGCTGGATTTCTGCGAAATCTATTGAAGTAGAGCGTCTTGTTA 1931850 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 | | ||| ||||||||||||||| | | |||| ||| ||||| ||| | Sbjct 1931849 AAGAAAATCTGGGGTAGAGCACTGTGTAAGTAAAGGGGAGATTATCTCTTACTGAACTTT 1931790 Query 271 TGCAAACTCCGAAT 284 |||||||||||||| Sbjct 1931789 TGCAAACTCCGAAT 1931776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689578542080