Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq875 190 7e-46 >seq875 Length=31036 Score = 190 bits (210), Expect = 7e-46 Identities = 287/405 (71%), Gaps = 21/405 (5%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| ||||||||||| ||| ||||| | ||||||||||| |||||||||| || Sbjct 29723 ACCTTTGTATGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAGTCAAACTACCCAGCA 29781 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||||| | || ||| | | ||| || ||||||| Sbjct 29782 AACACTGTCCCGTAGTTAGT---------AAGTCAACAGATC--------TCGGAGTGGT 29824 Query 196 ATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTA 255 |||||| | | ||| || | || ||| ||||| ||||||| ||| ||| Sbjct 29825 ATTTCACTATTGCCTCGTTAATCTCTGGCGAAAAAAAGTCATAAACTCCCACTTATTCTA 29884 Query 256 CACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTC 314 ||| | | |||| |||| | |||||| ||||| | |||||||||| |||| Sbjct 29885 CACTTAAGTCTTTGAATTACAATGCTTGCTTATAGTAAAGGTGCACGGGGTCTTTCCGTC 29944 Query 315 CTGCCGCGCGAAACGAGCATCTTTACT-CGTACTGCAATTTCACCGGGCCTGTGGTTGAG 373 | || || || ||||||| || | || || |||||||| | | | || | ||| Sbjct 29945 CAGCTGCAGGATGGTCGCATCTTCACGACCTA-TGTAATTTCACTGAGTCCCTGTTGGAG 30003 Query 374 ACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 ||||| ||| ||||||||| |||||| ||| ||||||||||||||||||||||||||||| Sbjct 30004 ACAGCGGGGAAGTCGTTACACCATTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCG 30063 Query 434 CTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||||| || |||||||| ||||||||||| |||| || Sbjct 30064 CTACCTTAGGACCGTCATAGTTACAGCCGCCGTTTACCGGGGTTT 30108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702378379520