Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 113 2e-19 >seq6 Length=3939081 Score = 113 bits (124), Expect = 2e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||||| | || |||| |||||||| |||||||| || || |||| Sbjct 3315935 CGTTGATGATCTCCTTCACTCGAGGCACTCCCAGGGTAACGTTCTTCGCGCTAACACCGG 3315994 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 | ||||||||||| | |||||||| ||| |||| |||||| ||||| ||||| |||| | Sbjct 3315995 CGAAGTGGAAGGTGTTGAGGGTCATCTGGGTGATGGGCTCTCCGATCGACTGGGCCGCCA 3316054 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 | | ||| |||||||||||| Sbjct 3316055 GAACGCCGCACATCTCGCCGGG 3316076 Score = 95.1 bits (104), Expect = 5e-14 Identities = 137/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 351090 CGTGGCCGTTGGTCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGT 351149 ||||| ||| |||| || ||||| |||||||||||||| ||| || || || ||| Sbjct 3324615 CGTGGAGGTTCATCTCATCGCCGTCGAAGTCGGCGTTGTACGGCGACGTCACGGAGAGGT 3324674 Query 351150 TGATGCCGATGGTGTAGCCCCGCGGGTTGCGCC-TCACGCGGTGCACCATGATGGACCCG 351208 | || | || || | | | || || |||| ||||| ||||||||||| Sbjct 3324675 TCATCCGGAACGT----CGACCAGTCCAGCACCTTCACCCGGTGGCCCATGATGGACATC 3324730 Query 351209 TTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCC 351268 |||||||||| ||||| || ||| ||||||||||||| | || | || ||||| |||| Sbjct 3324731 TTGTGGAGCGACGGCTGCCGGTTGAAGATGATGATGTCGTCGTCTCTCAGGTGCCGCTCC 3324790 Query 351269 ACCTTGTCGCCG 351280 ||| || |||| Sbjct 3324791 ACCGCGTAGCCG 3324802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084704450003460