Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq57 102 3e-16 seq126 96.9 1e-14 >seq57 Length=453916 Score = 102 bits (112), Expect = 3e-16 Identities = 136/187 (73%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 21721 GTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGT 21780 |||||| ||||||||| || ||||||||||| | |||||||||||||| | |||| | Sbjct 41834 GTTCCAAGATGAGTTGCGCAATGCGATCGCCGCGTTTGATTTCAAAGTCTTTGTCACTGA 41775 Query 21781 GGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGCGCCGA 21840 | ||||| | | | |||||| || | |||| || | ||| || || |||| Sbjct 41774 GATTGAACAAAAGAATACCGACCGGACCTCGATAATCCGCATCAATGACACCCGCTCCGA 41715 Query 21841 CGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTA-GTGGCCC 21899 | || | |||| ||||||||||| ||||| | |||||| | ||| ||||| ||| || Sbjct 41714 CATCAATGCCGTGCTTCAAGGCCAAGCCCGAGCGGGGAGCAATGCGACCGTACGTG--CC 41657 Query 21900 TTTGGGA 21906 || |||| Sbjct 41656 TTCGGGA 41650 >seq126 Length=613768 Score = 96.9 bits (106), Expect = 1e-14 Identities = 135/187 (72%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 21721 GTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGT 21780 |||||| ||||||||| || ||||||||||| | || || |||||||||||||| Sbjct 215976 GTTCCAAGATGAGTTGCGCAATGCGATCGCCGCGTTTAATGGCAAAGTCCTGGTCACTCA 215917 Query 21781 GGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGCGCCGA 21840 ||||| || | | |||||| ||| | |||| || | ||| || || |||| Sbjct 215916 AATTGAACAGAAGGATACCGACCGGGCCACGATAATCCGCATCAATGACACCAGCTCCGA 215857 Query 21841 CGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTA-GTGGCCC 21899 | || | |||| ||||||||||| ||||| | |||||| | ||| ||||| ||| || Sbjct 215856 CATCAATGCCGTGCTTCAAGGCCAACCCCGAGCGGGGAGCAATGCGACCGTACGTG--CC 215799 Query 21900 TTTGGGA 21906 || |||| Sbjct 215798 TTCGGGA 215792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084731128150410