Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1065 100 4e-19 >seq1065 Length=2073 Score = 100 bits (110), Expect = 4e-19 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || || ||||||||| ||| |||||||||| ||| Sbjct 1990 GTACAAAGGGCAGGGACGTAATCAATGCAAG-TTGATGACTTGCGTTTACTAGGAA-TTC 2047 Query 61 CTCGTTGAAGACCAACAATTGCAA 84 ||||||||||| || |||||||| Sbjct 2048 CTCGTTGAAGATTAAAAATTGCAA 2071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751941297470