Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq675 197 2e-48 seq75 109 9e-22 >seq675 Length=33256 Score = 197 bits (218), Expect = 2e-48 Identities = 145/168 (86%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC--ATCAGTAGGGTAAAACTAACCTGTCT 58 |||| || | ||||| | | | | |||||| |||||||||||||||||||||||||| Sbjct 33089 TACTGAGTTGGATTACTGTCGCGACAACGGTCTCATCAGTAGGGTAAAACTAACCTGTCT 33148 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct 33149 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTACC 33208 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct 33209 CTCTTCTGCGGGGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAA 33256 >seq75 Length=5518 Score = 109 bits (120), Expect = 9e-22 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3634 GGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGG 3575 Query 191 CTG 193 ||| Sbjct 3574 CTG 3572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854331152448