Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halocafeteria_20seosinensis_20[genbank_20GCA_5F001687465.1_202016- 07-19] 8,058 sequences; 44,620,845 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1065 73.4 2e-11 >seq1065 Length=2073 Score = 73.4 bits (80), Expect = 2e-11 Identities = 74/90 (82%), Gaps = 5/90 (6%) Strand=Plus/Plus Query 33 GCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGT 92 |||||| ||| | ||| |||| ||||| || ||||||| ||||||||||| |||| Sbjct 1936 GCCAAT-CCGGAGGTT-TCACCGGACCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGT 1991 Query 93 ACAAAGGGCAGGGACGTAATACAACGCAAG 122 |||||||||||||||||||| ||| ||||| Sbjct 1992 ACAAAGGGCAGGGACGTAAT-CAATGCAAG 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300777276440