Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq7233 172 8e-41 seq1378 109 8e-22 >seq7233 Length=843 Score = 172 bits (190), Expect = 8e-41 Identities = 147/179 (82%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 51 TAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATT 110 |||||||| ||||||| ||| || ||||||||| |||| |||| |||||| | Sbjct 1 TAGGAATT-CCTCGTTCGAGATTAATAATTGCAATAATCTGTCCCTATCACGGCACCCGT 59 Query 111 TCAAA-GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169 ||||| |||||||| ||||| |||| |||||| || ||||||| | ||||||||| Sbjct 60 TCAAAAGATTACCCAGACCTCTCGGTCAAGGTTCTACGCTCGTTGCANGTGTCAGTGTAG 119 Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| Sbjct 120 CGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAACTTCC 178 >seq1378 Length=788 Score = 109 bits (120), Expect = 8e-22 Identities = 65/68 (96%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 785 TCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCC 726 Query 221 AAACTTCC 228 ||||||| Sbjct 725 CAACTTCC 718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751842724135