Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7233 125 4e-27 seq1378 125 4e-27 >seq7233 Length=843 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-CATCGCC 59 |||||||||||||||||||||||| ||||||| || |||||| ||| || | | | Sbjct 485 GAACCCAAAGACTTTGATTTCTCGAAAGGTGCTGACGGAGTCAT--TGACAAACGACCGC 542 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 543 CAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 600 >seq1378 Length=788 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAA-CATCGCC 59 |||||||||||||||||||||||| ||||||| || |||||| ||| || | | | Sbjct 411 GAACCCAAAGACTTTGATTTCTCGAAAGGTGCTGACGGAGTCAT--TGACAAACGACCGC 354 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 353 CAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278343652710