Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1378 277 3e-72 seq7233 273 4e-71 >seq1378 Length=788 Score = 277 bits (306), Expect = 3e-72 Identities = 213/248 (86%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATG 131 ||| || |||||||||||||||||||||||||||| | || | | ||||||||||||| Sbjct 49 TTTTCTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCGTTGGATACATTAGCATG 108 Query 132 GAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||| ||||| | | | ||| |||||||||||||| | | || |||||||| Sbjct 109 GAATAATGAGATAGGGCCTTGATGTTTTATTTTGTTGGTTTGCACG-CCAAGGTAATGAT 167 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct 168 TAATAGGGATAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 227 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct 228 GGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAA 286 Query 311 GTTAGGGG 318 |||||||| Sbjct 287 GTTAGGGG 294 >seq7233 Length=843 Score = 273 bits (302), Expect = 4e-71 Identities = 210/244 (86%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATGGAAT 135 || |||||||||||||||||||||||||||| | || | | ||||||||||||||||| Sbjct 843 CTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCGTTGGATACATTAGCATGGAAT 784 Query 136 AATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| ||||| | | | ||| |||||||||||||| | | || |||||||||||| Sbjct 783 AATGAGATAGGGCCTTGATGTTTTATTTTGTTGGTTTGCACG-CCAAGGTAATGATTAAT 725 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||| Sbjct 724 AGGGATAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATGGAA 665 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct 664 GACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTA 606 Query 315 GGGG 318 |||| Sbjct 605 GGGG 602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915002417472