Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq10306 86.0 2e-14 seq3376 86.0 2e-14 >seq10306 Length=3084 Score = 86.0 bits (94), Expect = 2e-14 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 13 ATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAAT 72 || ||| ||||| |||| |||||||||||||||||| | ||| ||| || ||||||| Sbjct 2418 ATTAGCCCCGGCCAACTTCGTGCCAGCAGCCGCGGTTAGACGATGGGGGCGAGCGTTATC 2477 Query 73 CGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGT 109 | ||| ||||||||||||| || || ||| ||||| Sbjct 2478 CATAATGACTGGGCGTAAAGGGTTCGTAGGTTGTTGT 2514 Score = 84.2 bits (92), Expect = 6e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 280 ACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAA 333 ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 2686 ACGAAAGTGTGGGGAGCAAACAGGATTAGAGACCCTGGTAGTCCACACCCTAAA 2739 >seq3376 Length=2897 Score = 86.0 bits (94), Expect = 2e-14 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 13 ATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAAT 72 || ||| ||||| |||| |||||||||||||||||| | ||| ||| || ||||||| Sbjct 1095 ATTAGCCCCGGCCAACTTCGTGCCAGCAGCCGCGGTTAGACGATGGGGGCGAGCGTTATC 1036 Query 73 CGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGT 109 | ||| ||||||||||||| || || ||| ||||| Sbjct 1035 CATAATGACTGGGCGTAAAGGGTTCGTAGGTTGTTGT 999 Score = 84.2 bits (92), Expect = 6e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 280 ACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAA 333 ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 827 ACGAAAGTGTGGGGAGCAAACAGGATTAGAGACCCTGGTAGTCCACACCCTAAA 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289321588256