Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3376 226 9e-57 seq10306 149 2e-33 >seq3376 Length=2897 Score = 226 bits (250), Expect = 9e-57 Identities = 360/508 (71%), Gaps = 30/508 (6%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 || ||||||||||||||||||||||||||||||||||| | ||||| |||||| ||| Sbjct 702 TATGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGTCTATACAAGTGGTGGAACAT 643 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT--CTGACCCC 118 |||||||||| ||| | ||||| |||||||||| |||||| || | | | | Sbjct 642 GTGGTTTAATGCGATACTACGCGCCTAACCTTACCAGTTCTTGATATGATGATTTATTTC 583 Query 119 TCTAGAG-------ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGT 171 | | || ||||| | ||| | || | ||||||| ||||||| Sbjct 582 TGCAAAGAAAGTACATAGAATAATTGATTTCTTAAGTCA---TCACAGGTGTTGCATGGC 526 Query 172 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAG 231 ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| | | Sbjct 525 TGTCGTCAGCTCGTGTCGTAAGATGTTTGGTTAAGTCCCTTAACGAGCGCAACC--TCAA 468 Query 232 CTT--AGTTGCCATCATTAAGTTGGGCACTCTAAG----TTG-----ACTGCCGGTGACA 280 ||| | ||| | || || | || | ||| || |||||| | | Sbjct 467 CTTGCATTTG-CTTCTACAATCTAAACAATTAAAGAAAAATGCAAAAACTGCCCACAATA 409 Query 281 AACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACA 340 || |||||||||||| || |||| ||| || | ||| ||||||||| ||||||||||| Sbjct 408 AATGGGAGGAAGGTGGAGATGACGCCAAGTCCTTATGGCCCTTATGAACTGGGCTACACA 349 Query 341 CGTGCTACAATGGACAATACAA-AGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAA 399 | || |||||||| || |||| | |||| | || | | | | | || | | || Sbjct 348 CATGTTACAATGGGAAAAACAATATGGCA--CACACAATAATATGATGTATAT-CAACAA 292 Query 400 AGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGT 459 || || ||||||||||| || |||||||||| | || ||| ||||||| ||||| Sbjct 291 CCTTTGCCTTAGTTCGGATTGAAGGCTGCAACTCGCTTTCATAAAGGTGGAATCACTAGT 232 Query 460 AATCGTAGATCAGCATGCTACGGTGAAT 487 |||||| |||||| |||| ||||||||| Sbjct 231 AATCGTGGATCAGGATGCCACGGTGAAT 204 >seq10306 Length=3084 Score = 149 bits (164), Expect = 2e-33 Identities = 174/234 (74%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 || ||||||||||||||||||||||||||||||||||| | ||||| |||||| ||| Sbjct 2811 TATGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGTCTATACAAGTGGTGGAACAT 2870 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT--CTGACCCC 118 |||||||||| ||| | ||||| |||||||||| |||||| || | | | | Sbjct 2871 GTGGTTTAATGCGATACTACGCGCCTAACCTTACCAGTTCTTGATATGATGATTTATTTC 2930 Query 119 TCTAGAG-------ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGT 171 | | || ||||| | ||| | || | ||||||| ||||||| Sbjct 2931 TGCAAAGAAAGTACATAGAATAATTGATTTCTTAAGTCA---TCACAGGTGTTGCATGGC 2987 Query 172 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACC 225 ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| Sbjct 2988 TGTCGTCAGCTCGTGTCGTAAGATGTTTGGTTAAGTCCCTTAACGAGCGCAACC 3041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503675301440