Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7233 282 7e-74 seq1378 282 7e-74 >seq7233 Length=843 Score = 282 bits (312), Expect = 7e-74 Identities = 215/250 (86%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 110 GTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCC 169 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCA--AC-CATA 131 | ||||||| | | | | | |||||||||||||||| |||||| || || | Sbjct 170 CCAACTTCCTTCAGTTAATCACTGAAAGTCCCTCTAAGAAGC--GCCACCGCTACGCAAA 227 Query 132 GTCGAT---GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 228 TGCGTACCAGGGGCTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACA 287 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 347 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 348 TCAATCTGTC 357 >seq1378 Length=788 Score = 282 bits (312), Expect = 7e-74 Identities = 215/250 (86%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 786 GTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCC 727 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCA--AC-CATA 131 | ||||||| | | | | | |||||||||||||||| |||||| || || | Sbjct 726 CCAACTTCCTTCAGTTAATCACTGAAAGTCCCTCTAAGAAGC--GCCACCGCTACGCAAA 669 Query 132 GTCGAT---GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 668 TGCGTACCAGGGGCTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACA 609 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 608 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 549 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 548 TCAATCTGTC 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796633354509