Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq10306 134 3e-29 seq3376 134 3e-29 >seq10306 Length=3084 Score = 134 bits (148), Expect = 3e-29 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 ||||||||| |||| | ||||||||||||||| |||||||| | | || || || Sbjct 2340 GCTGGATCACACTTTTGTGTATTGTCCAATATTCCTCACTGCTGGCCTCAAAAGAAGCCT 2281 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || || ||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct 2280 GGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAACTAAAGATCGATGG 2221 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| ||| |||||| |||||| | |||||| Sbjct 2220 CTTGGTAAGCATTTACCTTACCAACAACCTAATC 2187 >seq3376 Length=2897 Score = 134 bits (148), Expect = 3e-29 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 ||||||||| |||| | ||||||||||||||| |||||||| | | || || || Sbjct 1173 GCTGGATCACACTTTTGTGTATTGTCCAATATTCCTCACTGCTGGCCTCAAAAGAAGCCT 1232 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || || ||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct 1233 GGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAACTAAAGATCGATGG 1292 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| ||| |||||| |||||| | |||||| Sbjct 1293 CTTGGTAAGCATTTACCTTACCAACAACCTAATC 1326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071768565920