Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1378 84.2 3e-14 seq7233 82.4 9e-14 >seq1378 Length=788 Score = 84.2 bits (92), Expect = 3e-14 Identities = 95/125 (76%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCT-ATTATTCCATGCTAATGTATTCG--G 66 |||||||||||||| || | || ||| |||||||||||||||||||| | | Sbjct 149 AAACCAACAAAATAAAACATCAAGGCCCTATCTCATTATTCCATGCTAATGTATCCAACG 90 Query 67 GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC 126 || ||||||||||||||||||||||||||| ||| | ||| | | | |||| || | | Sbjct 89 GCCTAAGCCTGCTTTGAACACTCTAATTTTTTCACAGAAAACGACGGGCTTCCCCCCCCC 30 Query 127 ACCAA 131 | ||| Sbjct 29 AACAA 25 >seq7233 Length=843 Score = 82.4 bits (90), Expect = 9e-14 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCT-ATTATTCCATGCTAATGTATTCG--G 66 |||||||||||||| || | || ||| |||||||||||||||||||| | | Sbjct 747 AAACCAACAAAATAAAACATCAAGGCCCTATCTCATTATTCCATGCTAATGTATCCAACG 806 Query 67 GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 || ||||||||||||||||||||||||||| ||| Sbjct 807 GCCTAAGCCTGCTTTGAACACTCTAATTTTTTCA 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595075517826