Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq10306 77.0 5e-12 seq3376 77.0 5e-12 >seq10306 Length=3084 Score = 77.0 bits (84), Expect = 5e-12 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 ||||| |||||||| |||| | | | |||||||||| ||| || ||| | |||||| Sbjct 2507 CCTACGAACCCTTTACGCCCAGTCATTATGGATAACGCTCGCCCCCATCGTCTAACCGCG 2448 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTAT 280 |||||||||||| |||| |||| |||| || Sbjct 2447 GCTGCTGGCACGAAGTTGGCCGGGGCTAAT 2418 >seq3376 Length=2897 Score = 77.0 bits (84), Expect = 5e-12 Identities = 71/90 (79%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 ||||| |||||||| |||| | | | |||||||||| ||| || ||| | |||||| Sbjct 1006 CCTACGAACCCTTTACGCCCAGTCATTATGGATAACGCTCGCCCCCATCGTCTAACCGCG 1065 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTAT 280 |||||||||||| |||| |||| |||| || Sbjct 1066 GCTGCTGGCACGAAGTTGGCCGGGGCTAAT 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828626661919