Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq10306 113 1e-22 seq3376 113 1e-22 >seq10306 Length=3084 Score = 113 bits (124), Expect = 1e-22 Identities = 144/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 3 ACTTTACAACCCGAAGGC--CTTCT-TCATACACGCGGCATGGCTGCATCAGGCTTGCGC 59 ||||||||||| |||| |||| || | | || | || |||| |||| ||| | Sbjct 2382 ACTTTACAACCTCAAGGAGTCTTCAATCGTTCGCGTAGTATAGCTGGATCACACTTTTGT 2323 Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 ||||| ||||||||| |||||||| | | || || |||| || ||||||||| || Sbjct 2322 GTATTGTCCAATATTCCTCACTGCTGGCCTCAAAAGAAGCCTGGGCCTTGTCTCAGTCCC 2263 Query 120 AGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC 179 |||||||||| |||||||||||||||| ||| ||||| | || ||| || ||||| Sbjct 2262 AGTGTGGCTGATCATCCTCTCAGACCAACTAAAGATCGATGGCTTGGTAAGCATTTACCT 2203 Query 180 CGCCAACTAGCTAATC 195 ||||| | |||||| Sbjct 2202 TACCAACAACCTAATC 2187 >seq3376 Length=2897 Score = 113 bits (124), Expect = 1e-22 Identities = 144/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 3 ACTTTACAACCCGAAGGC--CTTCT-TCATACACGCGGCATGGCTGCATCAGGCTTGCGC 59 ||||||||||| |||| |||| || | | || | || |||| |||| ||| | Sbjct 1131 ACTTTACAACCTCAAGGAGTCTTCAATCGTTCGCGTAGTATAGCTGGATCACACTTTTGT 1190 Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 ||||| ||||||||| |||||||| | | || || |||| || ||||||||| || Sbjct 1191 GTATTGTCCAATATTCCTCACTGCTGGCCTCAAAAGAAGCCTGGGCCTTGTCTCAGTCCC 1250 Query 120 AGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC 179 |||||||||| |||||||||||||||| ||| ||||| | || ||| || ||||| Sbjct 1251 AGTGTGGCTGATCATCCTCTCAGACCAACTAAAGATCGATGGCTTGGTAAGCATTTACCT 1310 Query 180 CGCCAACTAGCTAATC 195 ||||| | |||||| Sbjct 1311 TACCAACAACCTAATC 1326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222136096064