Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7233 203 6e-50 seq1378 138 2e-30 >seq7233 Length=843 Score = 203 bits (224), Expect = 6e-50 Identities = 209/269 (78%), Gaps = 11/269 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA--GGCCCGCTTTGGCG----GGTCGCCGGCT 73 || ||||||| |||||||||||||| || ||| || ||| ||| || ||| Sbjct 266 GAACGAGACCCCCGCCTGCTAAATAGCCCCTGGTACGCATTTGCGTAGCGGTGGC--GCT 209 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| || | | || | || ||||||| | ||||||||||||||||||| Sbjct 208 TCTTAGAGGGACTTTCAGTGATTAA-CTGAAGGAAGTTGGGGGCAATAACAGGTCTGTGA 150 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| ||||||||||||||||||||||||||| ||||||| | || Sbjct 149 TGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGACACNTGCAACGAGCGTAGAAC 90 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| |||||||||||||||| | || || |||| | |||| ||| ||||| Sbjct 89 CTTGACCGAGAGGTCTGGGTAATCTTTTGAACGGGTGCCGTGATAGGGACAGATTATTGC 30 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTA 280 ||||||| ||| |||||||||| |||| Sbjct 29 AATTATTAATCTCGAACGAGGAATTCCTA 1 >seq1378 Length=788 Score = 138 bits (152), Expect = 2e-30 Identities = 130/161 (81%), Gaps = 11/161 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA--GGCCCGCTTTGGCG----GGTCGCCGGCT 73 || ||||||| |||||||||||||| || ||| || ||| ||| || ||| Sbjct 630 GAACGAGACCCCCGCCTGCTAAATAGCCCCTGGTACGCATTTGCGTAGCGGTGGC--GCT 687 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| || | | || | || ||||||| | ||||||||||||||||||| Sbjct 688 TCTTAGAGGGACTTTCAGTGATTAA-CTGAAGGAAGTTGGGGGCAATAACAGGTCTGTGA 746 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 ||||||||||||| ||||||||||||||||||||||||||| Sbjct 747 TGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGACA 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946995508992