Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterococcus_20sp._20DN1_20[genbank_20GCA_5F000498555.1_202013-11- 22] 21,589 sequences; 60,742,704 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq160 138 2e-30 >seq160 Length=220 Score = 138 bits (152), Expect = 2e-30 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||| || || || |||| ||| |||| Sbjct 21 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTTTATGGGGTTGGCTGAACAGCCAGT 78 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 79 GCCCCGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819028669696