Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1601 134 1e-29 >seq1601 Length=10388 Score = 134 bits (148), Expect = 1e-29 Identities = 137/178 (77%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||||||||||||||| ||||| |||||||| | | ||| | Sbjct 4375 CTGAAGCTTAGTGGCTTTTCTTGGAAGCATGGTATCAATCACTTCGTGAGC---AAGCTC 4319 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACC 124 |||||| |||| || | | ||||| |||||||| ||||| ||| ||||| | Sbjct 4318 ACTCGTTATCACGTCTCAGTCTTAGCTCTCCGGATTTGCCTAAAGAACCAACCTACACGC 4259 Query 125 TTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT 182 || ||| ||||| ||||| || |||| |||| ||||||||||||| ||||||||| Sbjct 4258 TTGAACCGGGACATCCAACACCCGGCTGACCTAACCTTCTCCGTCCCCACATCGCATT 4201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518353380774