Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3028 105 3e-21 seq4039 89.7 2e-16 seq2156 86.0 3e-15 >seq3028 Length=3825 Score = 105 bits (116), Expect = 3e-21 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1420 GGAAAAGAAACTAACGAGGATTCCCTCAGTAACGGCGAGTGAACGGGGAAGAGCCCAGCG 1479 Query 61 CCGAATCC 68 | ||||| Sbjct 1480 CTAAATCC 1487 >seq4039 Length=2236 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 897 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 839 >seq2156 Length=6842 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| | ||||||| ||||||||||||||||| ||||| ||||||||| Sbjct 2317 GGAAAAGAAACTAACAAAGATTCCCCTAGTAACGGCGAGTGAACGGGGAAAAGCCCAGCG 2258 Query 61 CCGAATC 67 | |||| Sbjct 2257 CTCAATC 2251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230379948720