Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq1616 91.5 2e-16 >seq1616 Length=10241 Score = 91.5 bits (100), Expect = 2e-16 Identities = 88/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 20 GCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCTGGCCGGTGTAGC 79 ||| ||||| | ||||||| ||||| ||| |||| |||||||||||||| ||||| || | Sbjct 4652 GCGGCGCTTCA-CTTTGCCAAGGTAGTGCGTGCGTGCGACGATTTCCTGACCGGTATAAC 4594 Query 80 AGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAGCATTTGCGG 131 ||||||||||||| | | || || | ||| | ||||| | |||||| || Sbjct 4593 AGCCTTTCTTGAAATTAATCCCACCCAGGGCATCAAGGTTTATCATTTGAGG 4542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735933812210