Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq2982 105 1e-20 >seq2982 Length=3949 Score = 105 bits (116), Expect = 1e-20 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 42 TTCTGCAGGTGGCGACCCTGCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGA 101 ||||| | || ||||| || | |||||| || | ||||| || || || || || ||| Sbjct 1952 TTCTGTTGATGACGACCATGTTGCGTCTGTCACTCAACGTGGCTTCTACCCGTGTTGTGC 1893 Query 102 TGCTCCACGGCCAGGACGGCCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGG 161 || | || || | ||| | | || |||||||| || || | || || || | Sbjct 1892 TGACTGAAGGTCATGCCGGTCCGGATGCAGCCGGTAAAGTCATTGAAGCGTTTGGCCACT 1833 Query 162 TGGTGATCGGCGGTAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCA 221 | ||||||| || || || | ||| ||||||||||| || | ||||| | ||||||| Sbjct 1832 TTTTGATCGGTGGCAATTATGCGGTGGGTATCGTGGTCTTTGTCATCCTCACCATCATCA 1773 Query 222 ACTTTGTGGTGGTGACCAAGGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCC 281 ||||| ||| | ||||| || || || || ||| | || ||| | || |||||||||| Sbjct 1772 ACTTTACCGTGATCACCAAAGGTGCTGGTCGTATTGCAGAAGTGGGTGCACGGTTTACCC 1713 Query 282 T 282 | Sbjct 1712 T 1712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809527193431