Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq889 122 1e-25 >seq889 Length=19164 Score = 122 bits (134), Expect = 1e-25 Identities = 143/192 (74%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || |||||||| |||| ||||||| |||||||| ||||| ||||||| || |||||||| Sbjct 4559 GCCAGGAAGGCCTCTT-GTGGAATCTCCACGTTACCCACCTGCTTCATACGCTTTTTACC 4501 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 | ||||| || || |||| |||||| || || | | || ||||| ||||||||||| Sbjct 4500 TTCTTTTTGTTTTTCCAGCAACTTGCGTTTGCGTGTGATATCGCCGCCATAGCATTTGGC 4441 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 | ||||| || | | |||||||| | |||||||| || | | ||||| | Sbjct 4440 AATCACGTTTTTACGCATGGCCTTGACCGTTTCGCGCGCAATAATGTTGGCACCAATAGA 4381 Query 276 GGCCTGGATCGC 287 |||||| ||||| Sbjct 4380 GGCCTGAATCGC 4369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838322171328