Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq3691 100 5e-19 >seq3691 Length=3329 Score = 100 bits (110), Expect = 5e-19 Identities = 142/196 (72%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 136 CTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCT 195 ||||||| |||||||||||| |||||| | ||| || |||| || | |||| | Sbjct 1578 CTTTAACGAACTATTCCGTCAGTTCGCGGCGCTTTCATCACTCCGTCGCCCCATCACAGT 1637 Query 196 CAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACC 254 | |||||| |||||| ||||| || ||||||| | || || ||||| | || Sbjct 1638 AATTAGTAGTACGGGAATATTAACCCGTTG-GCCATCGACTGTC-CCTTTCGGGTTCGCC 1695 Query 255 TTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCG 314 ||| ||||||||| |||| | | ||||||| | | ||||||||||||||||||| | Sbjct 1696 TTAGGACCCGACTAACCCACAGCTGATTAGCATAGCTGTGGAAACCTTAGTCTTTCGGTG 1755 Query 315 AGGGGGTTTCCCACCC 330 | ||||||| | ||| Sbjct 1756 TGCGGGTTTCTCGCCC 1771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959883974400