Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq2382 111 3e-22 >seq2382 Length=6299 Score = 111 bits (122), Expect = 3e-22 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 22 CGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATGGTGGCGACAAACGCCACGGC 81 ||||| |||||||||||||| || ||||| || ||||| || ||||| ||||| || Sbjct 5804 CGGCAGAAACACCAGGTTGGCCAGCGCAACGCCATAAATGGTCGCCACAAAAGCCACTGC 5745 Query 82 AATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCCCATCACGTGGATCAGGCCCAT 141 || ||||| || | || | ||||| | ||||| |||| || ||||||||||| | Sbjct 5744 GATACCGCTACCGATTTTGGCCGGGTCAGACAGGTTTTCCATGACATGGATCAGGCCTAG 5685 Query 142 CACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 ||||||||| || ||||| | |||||||| || || || Sbjct 5684 CACCGCACCAATAATGCCCACAGTCGGCGCATAACCACC 5646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988680493632