Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq6290 132 1e-28 >seq6290 Length=1742 Score = 132 bits (146), Expect = 1e-28 Identities = 166/227 (73%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 26 GGCGGC---CTGTTCCCGTTCCTGTTCATCACCATTGCCTGTGGCGCGGTCTCGGGTTTC 82 |||||| ||||||||||| | || |||||||||||||| || ||| | || ||||| Sbjct 956 GGCGGCAAGCTGTTCCCGTTTGTATTTATCACCATTGCCTGCGGGGCGATTTCCGGTTTT 897 Query 83 CATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTCGCCAGTGAGAGCCATGCCCGT 142 ||||| |||| || |||||||| || ||| || || ||||||| || | ||| Sbjct 896 CATGCCTTGATTGCCAGTGGCACCACCCCTAAGCTGATCACCAGTGAAAGTGACATCCGC 837 Query 143 TACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGCGATGGTTGCC 202 || |||||||||| |||| || |||| || ||||| | ||||| ||| |||| Sbjct 836 ATGATAGGTTACGGCGCCATGTTGCTGGAAAGCTTTGTGGCACTGATGGCCATGATTGCG 777 Query 203 GCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAACAGCCCGGC 249 || | | |||| || ||||||| |||||| || ||||||||||| Sbjct 776 GCGACTATCCTTGAACCGGGCGTGTTCTTCGCGATCAACAGCCCGGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161459609024