Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq8732 82.4 9e-14 seq5267 82.4 9e-14 seq2031 82.4 9e-14 seq2766 80.6 3e-13 >seq8732 Length=1271 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 238 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 179 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 178 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 136 >seq5267 Length=2103 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 903 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 962 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 963 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 1005 >seq2031 Length=8411 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 295 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 354 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 355 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 397 >seq2766 Length=8717 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 5910 CCAACACAATAGGATCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 5968 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 5969 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 6006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595130312124