Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq3787 122 2e-25 >seq3787 Length=3211 Score = 122 bits (134), Expect = 2e-25 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 71 GCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCAT 130 ||||||| | |||||||| ||||||||| ||||||||||||| || || |||||||| Sbjct 3143 GCCGCCGGTGCTGGCGGTCAAACTGCAGGAACTGTTCGGCCTGGCCGAAACCCCGCGCAT 3084 Query 131 TGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTC-CCCGTCGCGCAGGCCGGTGC 189 ||||| || ||| | | | ||||||||||||| |||| || || | || ||| Sbjct 3083 TGCCGATGGCCGCATCCCGCTGACCCTGCACCTGCTGTCGCCCGGCG-GCCGCCCACTGC 3025 Query 190 AGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATC 249 |||| || ||||||||| | ||||||| || ||||| | || || || || || Sbjct 3024 AGGTCACGCAGGATCTGAAAAGCTTCTGGGCCAACACCTATCCGGACGTCAAAAAAGAAA 2965 Query 250 TGAAGGGGCGGTATCC 265 ||||||| |||||||| Sbjct 2964 TGAAGGGCCGGTATCC 2949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033475079104