Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq3691 114 9e-24 >seq3691 Length=3329 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 641 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 700 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | ||| |||| || |||||| | ||| |||||||||||| Sbjct 701 CTTTCGTACCTGATCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351960116200