Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq9712 82.4 2e-13 >seq9712 Length=1154 Score = 82.4 bits (90), Expect = 2e-13 Identities = 107/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 164 CCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAG 223 || |||||||||||||| ||||| || |||| | ||||| ||| ||||| Sbjct 225 CCTGCCAGGCCGTCCTCACCCCATAAAAAGCTACGGCAATGCGCATGTTCAAAAGGGAAA 284 Query 224 TAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCG 283 || |||||| ||||| | | ||| || |||||||| ||||| ||||| || | ||| Sbjct 285 TAATGCCAGGCATCGCCGTTAGTGCTATAATCTTCGCGTACCGTTCCCCACTGTCTTTCA 344 Query 284 CTCAGGTAGGGGCCCCACTCGCGCCAG 310 |||| ||||| ||||||| | ||||| Sbjct 345 CTCAAATAGGGCCCCCACT-GTGCCAG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007878173120