Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq643 84.2 9e-11 >seq643 Length=24036 Score = 84.2 bits (92), Expect = 9e-11 Identities = 126/176 (72%), Gaps = 15/176 (9%) Strand=Plus/Plus Query 222532 GACTTTGGGTTCGCGCGGATCAAGGAAACCAACGCC---ACCATGACACGG---TGCGGC 222585 |||||||| |||||||| |||||| | ||| || |||||| || || ||| Sbjct 17628 GACTTTGGCCTCGCGCGGGTCAAGG---CGCACGTGCAGACGATGACAGGGAACTGTGGC 17684 Query 222586 ACGCCGTACTGGACGGCACCCGAGATCAT---CACCCAAGAGCGCTACACCGAGAAGGCC 222642 ||| | | |||| ||| ||||| || | || |||| || ||||| ||||||||| Sbjct 17685 ACGGTGCAGTGGATGGCGCCCGAAGTCTTGGGCAACCAAAAG---TACACGGAGAAGGCC 17741 Query 222643 GACGTCTACTCGTTCGGCATCATCATGTGGGAGGTCATCACGGGCAAGCGTCCCTA 222698 ||||| | ||||| || ||| |||| |||||| | |||||||| || |||| || Sbjct 17742 GACGTGTTTTCGTTTGGGATCGTCATTTGGGAGATTGTCACGGGCGAGTGTCCGTA 17797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084408500426628