Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq5311 82.4 9e-11 >seq5311 Length=2084 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 89333 ATTGTGGTGGTCCTGGTGCAGGTCACTTTGTCAAGATGGTTCACAATGGTGTTGAATATG 89392 ||||||||| || ||||| ||||| |||| ||| ||||| || ||||| |||| || | Sbjct 973 ATTGTGGTGATCACGGTGCGGGTCATTTTGCCAAAATGGTGCATAATGGCATTGAGTACG 1032 Query 89393 GCATGATGCAAGCATATGCTGAAGGATTTAACATT 89427 |||||||||| || | ||| ||||| ||| | ||| Sbjct 1033 GCATGATGCAGGCTTTTGCAGAAGGCTTTGAAATT 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559243499522400