Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq575 86.0 2e-11 >seq575 Length=26142 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 159881 AGAGAAGAGCAATAGTCTAGTTTGTCCAGGTTAACAATGTAGTAATCGGGATAGGTCTTG 159940 ||| ||||||||||||| || ||| ||||| ||||| ||||| | ||||| |||| | Sbjct 3835 AGACAAGAGCAATAGTCGAGCGAGTCGAGGTTTACAATATAGTACTGTGGATATGTCTGG 3776 Query 159941 TGCAGGTGAACGATGACATGAGAAGCGATGAAACCACAACCACCAGTCACTAGAATGCGC 160000 ||||||| | ||| || ||| ||||||| || || |||||||| ||||||||| Sbjct 3775 ACGAGGTGAATCACGACGTGCGAACCGATGAATCCGGCGCCGCCAGTCACGAGAATGCGC 3716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884594521806798