Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq302887 78.8 2e-12 seq286883 77.0 6e-12 >seq302887 Length=126 Score = 78.8 bits (86), Expect = 2e-12 Identities = 77/98 (79%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| ||| | ||||||||| ||| ||||| || | | Sbjct 15 AGGGGAGTGAAAGAGATCCTGAAACCGTGTGCCTACAAGTAGTCAGAGCCC-GTTAACGG 73 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 108 |||| ||||||||||||| | ||||| || ||||||| Sbjct 74 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA 111 >seq286883 Length=157 Score = 77.0 bits (84), Expect = 6e-12 Identities = 89/119 (75%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 144 TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCGCTAGACGCGAAAC 202 |||||| || ||||||||| || || |||||| |||| | || |||||| |||| | Sbjct 130 TAGCCGTAGCGAAAGCGAGTCTGAATAGGGCGTTTGAGTCGCCGGGTCTAGACCCGAAGC 71 Query 203 CTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACC 261 |||||||||||| | |||| ||||| |||||| ||| |||||| ||||||| Sbjct 70 GGAGTGATCTACCCATGGCCAGGGTGAAGCGACGGTAAGACGTCGTGGAGGCCCGAACC 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 969765029376