Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq232671 129 9e-28 seq2802 93.3 6e-17 seq2801 93.3 6e-17 seq125217 89.7 8e-16 seq211149 87.8 3e-15 >seq232671 Length=81 Score = 129 bits (142), Expect = 9e-28 Identities = 77/81 (95%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 || |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 81 ACGCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 22 Query 207 CCTGTTATTGCCTCAAACTTC 227 |||||||||||||| |||||| Sbjct 21 CCTGTTATTGCCTCCAACTTC 1 >seq2802 Length=82 Score = 93.3 bits (102), Expect = 6e-17 Identities = 64/70 (91%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| |||||| |||||||||||| |||||||||| ||| Sbjct 15 GTACAAAGGGCAGGGACGTAATCAATGCGAGC-TGATGACTCGCGTTTACTAGGAA-TTC 72 Query 61 CTCGTTGAAG 70 |||||| ||| Sbjct 73 CTCGTTCAAG 82 >seq2801 Length=81 Score = 93.3 bits (102), Expect = 6e-17 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 109 TTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167 ||||| |||||||||| | | || |||||||||| | ||||||||||| ||||||||| Sbjct 78 TTTCAGAAGATTACCCAGGCTCTTCAGCCAAGGTGAAAAACTCGTTGAATGCATCAGTGT 19 Query 168 AGCGCGCGTGCGGCCCAG 185 |||||||||||||||||| Sbjct 18 AGCGCGCGTGCGGCCCAG 1 >seq125217 Length=81 Score = 89.7 bits (98), Expect = 8e-16 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 29 GAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGAT 88 ||||| ||||||| ||| |||||||||| ||||||||| ||| |||| |||||||||| | Sbjct 81 GAGCT-GATGACTAGCGTTTACTAGGAA-TTCCTCGTTCAAGTCCAATAATTGCAATGGT 24 Query 89 CTATCCCCATCACGATGAAATTT 111 ||||||| | ||||||| | ||| Sbjct 23 CTATCCCTAGCACGATGCACTTT 1 >seq211149 Length=81 Score = 87.8 bits (96), Expect = 3e-15 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 109 TTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167 ||||| |||||||||| | | || |||||||||| ||||||||||| ||||||||| Sbjct 78 TTTCAGAAGATTACCCAGGCTCTTCAGCCAAGGTGAAGAACTCGTTGAATGCATCAGTGT 19 Query 168 AGCGCGCGTGCGGCCCAG 185 |||||||||||||||||| Sbjct 18 AGCGCGCGTGCGGCCCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749727203845