Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2543 138 2e-30 seq2542 134 3e-29 >seq2543 Length=144 Score = 138 bits (152), Expect = 2e-30 Identities = 92/101 (91%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || |||||||||||||||||||||||||||| | ||||| ||||||||||||||| || Sbjct 144 TTTAATTGTCAGAGGTGAAATTCTTGGATTTCTGAAAGACGAACTACTGCGAAAGCATTT 85 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||||||| |||||||||||||||| Sbjct 84 ACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 45 >seq2542 Length=529 Score = 134 bits (148), Expect = 3e-29 Identities = 116/140 (83%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATG 131 |||||| |||||||||||||||||| ||||||||| | || | ||||||||||||||| Sbjct 391 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCTTACGCCGTTGAATACATTAGCATG 450 Query 132 GAATAATAGAATAGGAC-GTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| ||||| | || | |||||||||||||||| | | ||| | |||||| Sbjct 451 GAATAATAAGATAGGGCTTTGGTGGTCTATTTTGTTGGTTTGCACG-CCGAAGCAATGAT 509 Query 191 TAATAGGGATAGTCGGGGGT 210 ||||||||||||| |||||| Sbjct 510 TAATAGGGATAGTTGGGGGT 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912344731584