Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2749 174 7e-41 seq1890 174 7e-41 seq3748 132 2e-28 >seq2749 Length=199 Score = 174 bits (192), Expect = 7e-41 Identities = 108/116 (93%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 116 TGAGTGTGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 57 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 56 GCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 1 >seq1890 Length=159 Score = 174 bits (192), Expect = 7e-41 Identities = 125/144 (87%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 56 GAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGA 115 || |||||||| ||||||| |||||||| | ||||| |||||||| |||| ||||||||| Sbjct 1 GACTGCAGCTCAAAATGGGTGGTAAATTCCATCTAAGGCTAAATACTGGCGAGAGACCGA 60 Query 116 TAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCA 175 ||||| ||||||| |||| |||||||| |||| |||||| |||||||||||||||| | Sbjct 61 TAGCGAACAAGTACCGTGAGGGAAAGATGCAAAGAACTTTGAAAAGAGAGTTAAAAAGTA 120 Query 176 CGTGAAATTGTTGAAAGGGAAGCG 199 | |||||||| ||||||||||||| Sbjct 121 CTTGAAATTGCTGAAAGGGAAGCG 144 >seq3748 Length=190 Score = 132 bits (146), Expect = 2e-28 Identities = 94/108 (87%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||| | ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct 122 GGATGCTGAGGAAATGGTTTGATCCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACA 63 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 ||||||||||| || ||||| ||||||| || ||| |||||||||||| Sbjct 62 TCTATGCGAGTATTCGGGTGGCAAACCCTTGTGCGCAATGAAAGTGAA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073307964650