Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq190174 304 2e-80 >seq190174 Length=329 Score = 304 bits (336), Expect = 2e-80 Identities = 221/253 (87%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||||| Sbjct 57 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTAC-GACTTCGCAC 115 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| Sbjct 116 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCCACACCAGCTCC 175 Query 121 -AC----ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 || | | |||||||||| || ||||||||||||||||||||||| ||||||| Sbjct 176 CACCGCAAGGGTGTTCACCAGCCTGGGTCCCCCTTCTCCCGAAGTTACGGGGGCATTTTG 235 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 |||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||| Sbjct 236 CCGAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACCACCTGTG 295 Query 236 TCGGTTTACGGTA 248 ||||||| |||| Sbjct 296 TCGGTTTGGGGTA 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692301290359