Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq190174 84.2 2e-14 seq121990 78.8 1e-12 seq78948 78.8 1e-12 seq22139 78.8 1e-12 seq309469 77.0 3e-12 seq306789 75.2 1e-11 seq264938 75.2 1e-11 seq220108 75.2 1e-11 seq306221 73.4 4e-11 >seq190174 Length=329 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||| | ||| || ||||||| Sbjct 303 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGATAACTGTGGTTAAG 244 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 243 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 205 >seq121990 Length=81 Score = 78.8 bits (86), Expect = 1e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| |||||| | | ||||||| |||||| |||| | Sbjct 3 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCATGTTGCAGGAACTCGGCAAAATGACTC 62 Query 103 TGTAACTTCGGGATAAAG 120 ||||||||||||| |||| Sbjct 63 TGTAACTTCGGGAGAAAG 80 >seq78948 Length=81 Score = 78.8 bits (86), Expect = 1e-12 Identities = 63/76 (83%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| |||||| | | |||||||| |||||| |||| | Sbjct 76 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCATGCTGAAGGAACTCGGCAAAATGACTC 17 Query 103 TGTAACTTCGGGATAA 118 ||||||||||||| || Sbjct 16 TGTAACTTCGGGAGAA 1 >seq22139 Length=81 Score = 78.8 bits (86), Expect = 1e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| |||||| | | ||||||| |||||| |||| | Sbjct 3 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCATGTTGGAGGAACTCGGCAAAATGACTC 62 Query 103 TGTAACTTCGGGATAAAG 120 ||||||||||||| |||| Sbjct 63 TGTAACTTCGGGAGAAAG 80 >seq309469 Length=81 Score = 77.0 bits (84), Expect = 3e-12 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| |||||| | |||||||| |||||| |||| | Sbjct 5 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCATGTCGAAGGAACTCGGCAAAATGACTC 64 Query 103 TGTAACTTCGGGATAAA 119 ||||||||||||| ||| Sbjct 65 TGTAACTTCGGGAGAAA 81 >seq306789 Length=81 Score = 75.2 bits (82), Expect = 1e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| |||||| | | | |||||| |||||| |||| | Sbjct 2 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCATGTTGACGGAACTCGGCAAAATGACTC 61 Query 103 TGTAACTTCGGGATAA 118 ||||||||||||| || Sbjct 62 TGTAACTTCGGGAGAA 77 >seq264938 Length=81 Score = 75.2 bits (82), Expect = 1e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 45 GTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTG 104 ||||| || ||||||||| ||| |||||| | | |||| ||| |||||| |||| ||| Sbjct 1 GTTGAGTAAACTAAGGCGAGAGAGAGAATCATGTTGAAGGCACTCGGCAAAATGACTCTG 60 Query 105 TAACTTCGGGATAAAGGGT 123 ||||||||||| |||| || Sbjct 61 TAACTTCGGGAGAAAGAGT 79 >seq220108 Length=81 Score = 75.2 bits (82), Expect = 1e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 51 TATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAACTT 110 || ||||||||| ||| |||||| | | |||||||| |||||| |||| ||||||||| Sbjct 3 TAAACTAAGGCGAGAGAGAGAATCATGTTGAAGGAACTTGGCAAAATGACTCTGTAACTT 62 Query 111 CGGGATAAAGGGTCCC 126 ||||| |||| || || Sbjct 63 CGGGAGAAAGAGTACC 78 >seq306221 Length=81 Score = 73.4 bits (80), Expect = 4e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 43 GGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCC 102 ||||||| || ||||||||| ||| ||||| | | |||||||| |||||| |||| | Sbjct 73 GGGTTGAGTAAACTAAGGCGAGAGAGAGAATCGTGTTGAAGGAACTCGGCAAAATGACTC 14 Query 103 TGTAACTTCGGGA 115 ||||||||||||| Sbjct 13 TGTAACTTCGGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529594535482