Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq190174 156 1e-35 seq131558 105 2e-20 seq274445 77.0 8e-12 seq195662 73.4 1e-10 >seq190174 Length=329 Score = 156 bits (172), Expect = 1e-35 Identities = 175/233 (75%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 |||||||||| ||||||||||||||||| || ||||| || ||| || || ||| | Sbjct 58 TTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACTTCGCACGG 117 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314 ||||||||||| ||||||||||| | ||||| ||| ||||| || |||| | Sbjct 118 ACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCCACACCAGCTCCCA 177 Query 315 GAGCAAGTCC-TTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCC 373 ||||| |||||| | || | ||||||||||||||||||| | | ||||||| Sbjct 178 CCGCAAGGGTGTTCACCAGCCTGGGTCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCC 237 Query 374 TAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||| || |||| |||| | |||||| |||||||||||| ||||| Sbjct 238 GAGTTCCTTAACCACAGTTATCTCGATCGCCTTAGTATTCTCTACCTGACCAC 290 >seq131558 Length=182 Score = 105 bits (116), Expect = 2e-20 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | |||||| ||| |||||||| | ||||| Sbjct 80 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGAGACAGCAGAGAAGTCGTT 139 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 115 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 182 >seq274445 Length=81 Score = 77.0 bits (84), Expect = 8e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 101 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160 |||||||||||||||||||||||||||||| | ||||| ||||||||||| |||| || Sbjct 81 CGACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACATCCGCCGTTTACTGGGGGTT 22 >seq195662 Length=81 Score = 73.4 bits (80), Expect = 1e-10 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 103 ACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160 |||||||||||||||||||||||||||| | ||||| || ||||||||| |||| || Sbjct 81 ACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCTGCCGTTTACTGGGGGTT 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1256866518336