Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq190174 172 1e-40 seq131558 109 1e-21 seq274445 93.3 9e-17 seq195662 89.7 1e-15 seq299817 86.0 1e-14 seq301786 80.6 6e-13 seq50773 80.6 6e-13 seq251947 78.8 2e-12 >seq190174 Length=329 Score = 172 bits (190), Expect = 1e-40 Identities = 192/259 (74%), Gaps = 32/259 (12%) Strand=Plus/Plus Query 138 GCCGTTTACTGGGGCTTAAGTTCACTGCTTCG------ATTGCTCTAACAGATCCCCTTA 191 ||||||||||||||||||| ||| | |||||| | | | ||||| | ||| |||| Sbjct 1 GCCGTTTACTGGGGCTTAACTTCTCAGCTTCGCGGACGAATCCACTAACCGGTCCTCTTA 60 Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251 |||||||||||||||||||||||||| | ||||||||||||| |||||| ||| ||| Sbjct 61 ACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACTTCGCACGGACC 120 Query 252 TGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----------------- 294 ||||||||| |||||||||||||| || |||||||| || Sbjct 121 TGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCCACACCAGCTCCCACCG 180 Query 295 ------TG-TCA-TAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 || ||| || | || ||||||||||| ||||||||||| |||||||||||| Sbjct 181 CAAGGGTGTTCACCAGCCTGGGTCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAG 240 Query 346 TTCCTTAACAATAGTTCTC 364 ||||||||| | |||| || Sbjct 241 TTCCTTAACCACAGTTATC 259 >seq131558 Length=182 Score = 109 bits (120), Expect = 1e-21 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||||| | |||||||||| || ||||| Sbjct 80 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGAGACAGCAGAGAAGTCGTT 139 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCG 109 ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 140 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 182 >seq274445 Length=81 Score = 93.3 bits (102), Expect = 9e-17 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 95 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||||||||||||||||||||||||||| | |||||| |||||||||||||||| || Sbjct 81 CGACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACATCCGCCGTTTACTGGGGGTT 22 Query 155 AAGTTCACTGCTTC 168 | |||| ||| || Sbjct 21 ATATTCAATGCATC 8 >seq195662 Length=81 Score = 89.7 bits (98), Expect = 1e-15 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 97 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156 |||||||||||||||||||||||||||| | |||||| || |||||||||||||| ||| Sbjct 81 ACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCTGCCGTTTACTGGGGGTTAT 22 Query 157 GTTCACTGCTTC 168 |||| ||| || Sbjct 21 ATTCAATGCATC 10 >seq299817 Length=81 Score = 86.0 bits (94), Expect = 1e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 99 AAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGT 158 |||||||||||||||||||||||||| | |||||| |||| |||||||||||| ||| | Sbjct 1 AAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGACGTTTACTGGGGGTTATAT 60 Query 159 TCACTGCTTC 168 ||| ||| || Sbjct 61 TCAATGCATC 70 >seq301786 Length=81 Score = 80.6 bits (88), Expect = 6e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 102 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA 161 ||||||||||||||||||||||| | |||||| ||||||| ||||||||| ||| |||| Sbjct 81 GAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGGTTACTGGGGGTTATATTCA 22 Query 162 CTGCTTC 168 ||| || Sbjct 21 ATGCATC 15 >seq50773 Length=81 Score = 80.6 bits (88), Expect = 6e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 102 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA 161 ||||||||||||||||||||||| | |||||| ||||||| ||||||||| ||| |||| Sbjct 1 GAATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGCTTACTGGGGGTTATATTCA 60 Query 162 CTGCTTC 168 ||| || Sbjct 61 ATGCATC 67 >seq251947 Length=81 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 103 AATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCAC 162 |||||||||||||||||||||| | |||||| |||||||| |||||||| ||| |||| Sbjct 81 AATTTCGCTACCTTAGGACCGTCAGAGTTACAGCCGCCGTGTACTGGGGGTTATATTCAA 22 Query 163 TGCTTC 168 ||| || Sbjct 21 TGCATC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1059085492608