Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1304 136 6e-30 seq232671 113 7e-23 seq6971 104 4e-20 >seq1304 Length=153 Score = 136 bits (150), Expect = 6e-30 Identities = 124/153 (81%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 55 TCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114 ||||||||||||||||||||| ||||||| |||| | | |||| |||||||||||||| Sbjct 1 TCACAGACCTGTTATTGCCTCCAACTTCCTTTGGTTAGTCACCAAAAGTCCCTCTAAGAA 60 Query 115 GCCAGCCA-CCAAC-CATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT 170 | || | |||| || || | || ||| |||||||| |||||||||||||| Sbjct 61 GTCACAAAACCAATGCAAAGCATTAGTGCAACTAATTAGCAGGCGGAGGTCTCGTTCGTT 120 Query 171 ATCGGAATTAACCAGACAAATCACTCCACCAAC 203 | ||||||||||||||||||||||||||||||| Sbjct 121 AACGGAATTAACCAGACAAATCACTCCACCAAC 153 >seq232671 Length=81 Score = 113 bits (124), Expect = 7e-23 Identities = 65/67 (97%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 67 TCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGACCTGTTATTGCCTC 8 Query 76 AAACTTC 82 |||||| Sbjct 7 CAACTTC 1 >seq6971 Length=216 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 216 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794391803223