Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq93577 183 6e-44 >seq93577 Length=304 Score = 183 bits (202), Expect = 6e-44 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | | ||| ||||| ||||||||||| |||||| ||| ||||||||||| Sbjct 267 GGGACAGTGCCTGGTGGGTAGTTTAACTGGGGCGGTTGCCTCCTAAAAGGTAACGGAGGC 208 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 |||||||| | |||||||| ||| ||| || || | | |||| || ||| ||||| | Sbjct 207 GCCCAAAGGTTCCCTCAGCCTGGTTGGCAATCAGGTGTTGAGTGTAAGTGCACAAGGGAG 148 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| || || || ||| ||||||||||||||||||| || ||||||||| Sbjct 147 CTTGACTGTGAGACGTACATGTCGAGCAGGGACGAAAGTCGGGACTAGTGATCCGGCACC 88 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | ||||| | ||||||| ||||||||||| ||||| ||||||| Sbjct 87 GGCAAGTGGAAGCGGTGTCGCTCAACGGATAAAAGGTACCCCGGGGATA 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979335079008