Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq131558 109 6e-22 >seq131558 Length=182 Score = 109 bits (120), Expect = 6e-22 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||| |||| |||| ||||||| || |||| ||||||| | | Sbjct 49 CGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCG 108 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||||||||||| ||| |||||||||||||||||||||||||| Sbjct 109 AGTCTGTGGTTGAGACAGCAGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 168 Query 143 GACAAGGAATTTCG 156 |||||||||||||| Sbjct 169 GACAAGGAATTTCG 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545546178117