Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq233047 205 2e-50 seq143074 91.5 3e-16 seq57078 91.5 3e-16 >seq233047 Length=482 Score = 205 bits (226), Expect = 2e-50 Identities = 162/192 (84%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| || || | | | |||||||| | | ||| ||||||||| |||||| Sbjct 108 TTTACAACCCGAAGGCCGTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTGCGCCCA 165 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 166 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 225 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||||| |||||||| | | ||| ||||||||||||| ||||||||| ||| Sbjct 226 GTGGCCGATCACCCTCTCAGGTCGGCTACCCGTCGTCGCCTTGGTAGGCCATTACCCCAC 285 Query 182 CAACTAGCTAAT 193 |||| |||| || Sbjct 286 CAACAAGCTGAT 297 >seq143074 Length=81 Score = 91.5 bits (100), Expect = 3e-16 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 51 GCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTC 110 |||| |||||||||||||| ||||||||||||||||| | | ||||||| ||||||| Sbjct 80 GCTTGCGCCCATTGTCCAAGATTCCCCACTGCTGCCTTCGAACGAAGTCTGGGCCGTGTC 21 Query 111 TCAGTTCCAGTGTGACTG 128 ||||| |||||||| ||| Sbjct 20 TCAGTCCCAGTGTGGCTG 3 >seq57078 Length=81 Score = 91.5 bits (100), Expect = 3e-16 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| | ||||| |||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 81 CACGTGACATTG-CTGGATCAAGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTT 23 Query 89 CCGTAGGAGTCTGGACCGTGTC 110 | | ||||||| ||||||| Sbjct 22 CAAACGAAGTCTGGGCCGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068655542240