Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq12922 277 6e-72 seq286883 192 2e-46 seq190176 118 4e-24 seq751 114 5e-23 seq309564 84.2 8e-14 seq302887 82.4 3e-13 >seq12922 Length=651 Score = 277 bits (306), Expect = 6e-72 Identities = 207/241 (86%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 351 GGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAA 410 |||||||||||||||||||||||||| || | | | ||||||||||||||||||||||| Sbjct 651 GGCTACCCCACACGGGTTAACCTCGCCACCGAGCACTAACTCGCAGGCTCATTCTTCAAA 592 Query 411 AGGCACGCCGTCACCTGGTACCTAAA--AGGCACTTCAGCTCCGACGGATTGTAGGCACA 468 ||||||||| ||||| | ||| |||||| |||| ||||||||||| || Sbjct 591 AGGCACGCCATCACCCACCCTCCAAAGGAGGCACAG--GCTCTGACGGATTGTAAGCGTC 534 Query 469 TGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTAC 528 ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 533 CGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTAC 474 Query 529 TTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCAC 588 | |||||||||||||||||| | |||||| ||||||| |||||||||||| ||||||||| Sbjct 473 TAGTCCGCTATCGGTCACCAGGAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCAC 414 Query 589 A 589 | Sbjct 413 A 413 >seq286883 Length=157 Score = 192 bits (212), Expect = 2e-46 Identities = 135/154 (88%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285 |||| |||||||||||| |||||||| |||||||| ||||||| |||| |||||| | Sbjct 1 CAACTGAAGTGGGTTCGGGCCTCCACGACGTCTTACCGTCGCTTCACCCTGGCCATGGGT 60 Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTC 345 |||||||| |||||||||||| || | || ||||| ||||||||||| ||||||||||| Sbjct 61 AGATCACTCCGCTTCGGGTCTAGACCCGGCGACTCAAACGCCCTATTCAGACTCGCTTTC 120 Query 346 GCTACGGCTACCCCACACGGGTTAACCTCGCGAC 379 ||||||||||||||||||||||||||||||| || Sbjct 121 GCTACGGCTACCCCACACGGGTTAACCTCGCCAC 154 >seq190176 Length=609 Score = 118 bits (130), Expect = 4e-24 Identities = 98/117 (84%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||||| | |||| || ||||||||||||| ||| | ||||||||| |||||||||| Sbjct 494 TCGACTACGAACCTTA-TCGCCCGCAGTCTCACTGCCACACTCTCACTTACCGGCATTCG 552 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACC 116 |||||||| ||| || |||| | |||||| ||| | | ||||||||| |||||||| Sbjct 553 GAGTTTGGCTGACGTCAGTAACCCTGTGGGGCCCATCGGCCATCCAGTAGCTCTACC 609 >seq751 Length=150 Score = 114 bits (126), Expect = 5e-23 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 106 AGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAAC 165 ||||||||||| | | ||| || | | | | | |||| ||| |||||| ||| ||| Sbjct 138 AGTGCTCTACCCCATGAAAGGAAGATGATATGGTCTACCTCAATAGATTTCGCGGAAAAC 79 Query 166 CAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT 225 ||||||| | |||||||||| |||||||||||||||||||| |||||||| | |||| Sbjct 78 CAGCTATGTCCAAGTTTGATTAGCCTTTCACCCCTATCCACAAATCATCCCCGTATTTTT 19 Query 226 CAACCTAAGTGGGTTCGG 243 | || || |||||||||| Sbjct 18 CCACATACGTGGGTTCGG 1 >seq309564 Length=156 Score = 84.2 bits (92), Expect = 8e-14 Identities = 95/125 (76%), Gaps = 7/125 (6%) Strand=Plus/Plus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGT-GGGCCCCCTAGACCATCCAGTGCT 111 ||||||||||||||| ||| |||||||| | || ||| ||||||| ||| ||||||| Sbjct 29 GGCATTCGGAGTTTGACTGAATTCGGTAACCCGGTAGGGGCCCCTAGTCCAATCAGTGCT 88 Query 112 CTACCTCCGGGAAGAAAC---ACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||||| |||| | | || ||| |||||| ||||||| ||||||||| Sbjct 89 CTACCTCC---AAGACTCTTACCTTGAGGCTAGCCCTAAAGCTATTTCGGAGAGAACCAG 145 Query 169 CTATC 173 ||||| Sbjct 146 CTATC 150 >seq302887 Length=126 Score = 82.4 bits (90), Expect = 3e-13 Identities = 91/122 (75%), Gaps = 12/122 (10%) Strand=Plus/Minus Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447 ||||||| || ||||||| ||||||||||||| ||||| | || | || | Sbjct 110 AACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCGTTAAC-----GG-------G 63 Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTT 507 ||| ||| ||||||||||| ||||||||| || ||||||||||| | ||||| ||| Sbjct 62 CTCTGACTACTTGTAGGCACACGGTTTCAGGATCTCTTTCACTCCCCTTCCGGGGTGCTT 3 Query 508 TT 509 || Sbjct 2 TT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1811929396992