Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq233047 239 9e-61 seq233048 96.9 7e-18 seq143074 82.4 2e-13 >seq233047 Length=482 Score = 239 bits (264), Expect = 9e-61 Identities = 249/325 (77%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 139 GGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 198 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||| | Sbjct 199 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACCCGT 258 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| |||| | ||||||| | || || ||||||| ||||||| | | Sbjct 259 CGTCGCCTTGGTAGGCCATTACCCCACCAACAAGCTGATAGGCCGCGGGCCCATCCTGAA 318 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || ||| |||| | || |||| | | | ||| ||||||||| Sbjct 319 CCGCAAAAGCTTTCCACCAACCCCCATGCGAGAGAAAGTGAATATCCGGTATTAGACCCA 378 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| | |||| ||| | | ||||| | | |||||||||||||||||| ||| Sbjct 379 GTTTCCCAGGCTTATCCCAGAGTCCAGGGCAGATCACCCACGTGTTACTCACCCGTTCGC 438 Query 301 CACTAAGCTATATATCCAGCAAGCT 325 |||| | | || |||||||||| Sbjct 439 CACT---CGA-GTACCCAGCAAGCT 459 >seq233048 Length=347 Score = 96.9 bits (106), Expect = 7e-18 Identities = 142/201 (71%), Gaps = 10/201 (5%) Strand=Plus/Plus Query 119 ATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 ||||||| ||||||| || ||| ||||||||||| ||||| |||||| | |||||| | Sbjct 3 ATCGTCGCCTTGGTGAGCCGTTACCTCACCAACTAGCTAATGCGCCGCGGGTCCATCTGT 62 Query 179 CAGCGATAAAT---------CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGG 229 || | || | |||| | | ||| |||| | | | | | || ||| Sbjct 63 AAGTGGTAGCTAAAAGCCACCTTTTATGATTGAACCATGCGGTTCAATCA-AGCATCCGG 121 Query 230 TATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACT 289 ||||||| |||||| ||||| ||| ||| | ||||||||| | ||||||||||| Sbjct 122 TATTAGCCCCGGTTTCCCGGAGTTATCCCAGTCTTACAGGCAGGTTACCCACGTGTTACT 181 Query 290 CACCCGTCCGCCACTAAGCTA 310 |||||||||||| || | ||| Sbjct 182 CACCCGTCCGCCGCTGACCTA 202 >seq143074 Length=81 Score = 82.4 bits (90), Expect = 2e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 |||||||| ||| || |||||||||||||| | | |||||||||||||||||||||| Sbjct 73 CCCATTGTCCAAGATTCCCCACTGCTGCCTTCGAACGAAGTCTGGGCCGTGTCTCAGTCC 14 Query 84 CAATGTGGCCGTT 96 || |||||| ||| Sbjct 13 CAGTGTGGCTGTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 995285161728