Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq288409 118 9e-25 seq143115 84.2 2e-14 >seq288409 Length=185 Score = 118 bits (130), Expect = 9e-25 Identities = 97/118 (82%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 35 CTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGAC 94 |||| |||||| ||||| |||| ||| | || |||||||||| |||||||| | Sbjct 14 CTTTAAGGGATTCGCTCCACCTCACGGTATCGCAGCCCTCTGTACCAGCCATTGTAGCAT 73 Query 95 GTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 74 GTGTGAAGCCCTGGACATAAGGGGCATGATGACTTGACGTCATCCCCACCTTCCTCCG 131 >seq143115 Length=81 Score = 84.2 bits (92), Expect = 2e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 70 CCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTT 129 |||| ||| |||||||||| || |||| |||| | |||||||||||||||||||| Sbjct 76 CCCTTTGTCATTACCATTGTAGCACATGTGTAGCCAAGCTCATAAGGGCCATGAGGACTT 17 Query 130 GACGTCATCCCCACCT 145 |||||||||||||||| Sbjct 16 GACGTCATCCCCACCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414742708510